Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.79□□□□□ -0.36
Upk1aQ9D132 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Gm9719-201ENSMUST00000162765 543 ntBASIC12.79□□□□□ -0.36
Upk1aQ9D132 Gm43474-201ENSMUST00000196415 774 ntBASIC12.79□□□□□ -0.36
Upk1aQ9D132 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Dupd1-202ENSMUST00000224735 548 ntBASIC12.79□□□□□ -0.36
Upk1aQ9D132 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.79□□□□□ -0.36
Upk1aQ9D132 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Upk1aQ9D132 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.78□□□□□ -0.36
Upk1aQ9D132 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Gm8927-201ENSMUST00000181978 981 ntBASIC12.78□□□□□ -0.36
Upk1aQ9D132 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Gm3222-201ENSMUST00000071282 990 ntBASIC12.78□□□□□ -0.36
Upk1aQ9D132 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
Upk1aQ9D132 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms