Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.4□□□□□ -0.26
Ssu72Q9CY97 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ssu72Q9CY97 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Ssu72Q9CY97 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Gm15653-201ENSMUST00000119247 907 ntBASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Gm12260-201ENSMUST00000122447 411 ntBASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Gm27494-201ENSMUST00000184735 189 ntBASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Gm10766-202ENSMUST00000194123 606 ntBASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssu72Q9CY97 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Gm24543-201ENSMUST00000103867 82 ntBASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms