Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 CT030704.2-201ENSMUST00000228887 494 ntBASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RTRAFQ9CQE8 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RTRAFQ9CQE8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Gm7230-201ENSMUST00000173026 815 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms