Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Gm8000-201ENSMUST00000188378 592 ntBASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Gm11594-201ENSMUST00000122313 162 ntBASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Gm11025-201ENSMUST00000140773 466 ntBASIC12.17□□□□□ -0.46
Krt88Q9CPR6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Gm45453-201ENSMUST00000211758 853 ntBASIC12.17□□□□□ -0.46
Krt88Q9CPR6 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.17□□□□□ -0.46
Krt88Q9CPR6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Mir125a-201ENSMUST00000083545 68 ntBASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.17□□□□□ -0.46
Krt88Q9CPR6 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.17□□□□□ -0.46
Krt88Q9CPR6 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Krt88Q9CPR6 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms