Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Gm43125-201ENSMUST00000201724 730 ntBASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.26□□□□□ -0.29
Trim8Q99PJ2 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim8Q99PJ2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Gm5566-201ENSMUST00000116118 459 ntBASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Gm9824-201ENSMUST00000178707 561 ntBASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Mir6990-201ENSMUST00000183724 91 ntBASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Trim8Q99PJ2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms