Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Gm44397-201ENSMUST00000195950 113 ntBASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Gm7561-201ENSMUST00000211203 886 ntBASIC13.34□□□□□ -0.27
Clcc1Q99LI2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Gm5161-201ENSMUST00000075243 853 ntBASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clcc1Q99LI2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clcc1Q99LI2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.33□□□□□ -0.27
Clcc1Q99LI2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Clcc1Q99LI2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Clcc1Q99LI2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clcc1Q99LI2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clcc1Q99LI2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clcc1Q99LI2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Gm43630-201ENSMUST00000201550 776 ntBASIC13.33□□□□□ -0.28
Clcc1Q99LI2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Gm9899-201ENSMUST00000065519 555 ntBASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clcc1Q99LI2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcc1Q99LI2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcc1Q99LI2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcc1Q99LI2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clcc1Q99LI2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcc1Q99LI2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Clcc1Q99LI2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcc1Q99LI2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcc1Q99LI2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcc1Q99LI2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcc1Q99LI2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcc1Q99LI2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcc1Q99LI2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcc1Q99LI2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clcc1Q99LI2 Gm12957-201ENSMUST00000117835 377 ntBASIC13.32□□□□□ -0.28
Clcc1Q99LI2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.32□□□□□ -0.28
Clcc1Q99LI2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.32□□□□□ -0.28
Clcc1Q99LI2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms