Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.03□□□□□ -0.32
Rab28Q99KL7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab28Q99KL7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rab28Q99KL7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rab28Q99KL7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rab28Q99KL7 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rab28Q99KL7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rab28Q99KL7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rab28Q99KL7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rab28Q99KL7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rab28Q99KL7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rab28Q99KL7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rab28Q99KL7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.02□□□□□ -0.33
Rab28Q99KL7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Gm18473-201ENSMUST00000220543 868 ntBASIC13.02□□□□□ -0.33
Rab28Q99KL7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Gm5356-201ENSMUST00000093326 615 ntBASIC13.02□□□□□ -0.33
Rab28Q99KL7 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab28Q99KL7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.01□□□□□ -0.33
Rab28Q99KL7 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Gm5745-201ENSMUST00000183748 313 ntBASIC13.01□□□□□ -0.33
Rab28Q99KL7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Gm7287-201ENSMUST00000205267 602 ntBASIC13.01□□□□□ -0.33
Rab28Q99KL7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.01□□□□□ -0.33
Rab28Q99KL7 Itm2b-204ENSMUST00000228637 783 ntBASIC13.01□□□□□ -0.33
Rab28Q99KL7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.01□□□□□ -0.33
Rab28Q99KL7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab28Q99KL7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms