Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.33□□□□□ -0.44
Lims1Q99JW4 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.33□□□□□ -0.44
Lims1Q99JW4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Gm5425-201ENSMUST00000214125 459 ntBASIC12.33□□□□□ -0.44
Lims1Q99JW4 Gm5186-201ENSMUST00000218781 920 ntBASIC12.33□□□□□ -0.44
Lims1Q99JW4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.33□□□□□ -0.44
Lims1Q99JW4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Rubie-203ENSMUST00000227803 2430 ntBASIC12.32□□□□□ -0.44
Lims1Q99JW4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Mir874-201ENSMUST00000104769 76 ntBASIC12.32□□□□□ -0.44
Lims1Q99JW4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Gm12585-201ENSMUST00000117307 290 ntBASIC12.32□□□□□ -0.44
Lims1Q99JW4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.32□□□□□ -0.44
Lims1Q99JW4 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Gm43703-201ENSMUST00000200523 763 ntBASIC12.32□□□□□ -0.44
Lims1Q99JW4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lims1Q99JW4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lims1Q99JW4 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Gm13616-201ENSMUST00000120600 222 ntBASIC12.31□□□□□ -0.44
Lims1Q99JW4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.31□□□□□ -0.44
Lims1Q99JW4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lims1Q99JW4 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms