Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Gm9719-201ENSMUST00000162765 543 ntBASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Gm6916-202ENSMUST00000205523 195 ntBASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Thumpd1Q99J36 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.03□□□□□ -0.48
Thumpd1Q99J36 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Gm13015-201ENSMUST00000118674 204 ntBASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd1Q99J36 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd1Q99J36 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd1Q99J36 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd1Q99J36 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Thumpd1Q99J36 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.02□□□□□ -0.48
Thumpd1Q99J36 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd1Q99J36 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd1Q99J36 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd1Q99J36 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 7.2 ms