Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clip1Q922J3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clip1Q922J3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clip1Q922J3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clip1Q922J3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clip1Q922J3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clip1Q922J3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clip1Q922J3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Clip1Q922J3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clip1Q922J3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Clip1Q922J3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip1Q922J3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Clip1Q922J3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip1Q922J3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip1Q922J3 Gm13297-201ENSMUST00000120205 934 ntBASIC20.98■□□□□ 0.95
Clip1Q922J3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip1Q922J3 Gm37042-201ENSMUST00000193816 581 ntBASIC20.98■□□□□ 0.95
Clip1Q922J3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip1Q922J3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip1Q922J3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Clip1Q922J3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip1Q922J3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Clip1Q922J3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip1Q922J3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Clip1Q922J3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip1Q922J3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Clip1Q922J3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC20.98■□□□□ 0.95
Clip1Q922J3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip1Q922J3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip1Q922J3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Clip1Q922J3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip1Q922J3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clip1Q922J3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Clip1Q922J3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Clip1Q922J3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Clip1Q922J3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Clip1Q922J3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Clip1Q922J3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Clip1Q922J3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC20.97■□□□□ 0.95
Clip1Q922J3 Gm26083-201ENSMUST00000157904 193 ntBASIC20.97■□□□□ 0.95
Clip1Q922J3 Gm24548-201ENSMUST00000158650 108 ntBASIC20.97■□□□□ 0.95
Clip1Q922J3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC20.97■□□□□ 0.95
Clip1Q922J3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC20.97■□□□□ 0.95
Clip1Q922J3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clip1Q922J3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Clip1Q922J3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clip1Q922J3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clip1Q922J3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Clip1Q922J3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clip1Q922J3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Clip1Q922J3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clip1Q922J3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clip1Q922J3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clip1Q922J3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clip1Q922J3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clip1Q922J3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC20.97■□□□□ 0.95
Clip1Q922J3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clip1Q922J3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clip1Q922J3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC20.97■□□□□ 0.95
Clip1Q922J3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Clip1Q922J3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clip1Q922J3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Clip1Q922J3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clip1Q922J3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Clip1Q922J3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clip1Q922J3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clip1Q922J3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clip1Q922J3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clip1Q922J3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clip1Q922J3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC20.96■□□□□ 0.95
Clip1Q922J3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clip1Q922J3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clip1Q922J3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Clip1Q922J3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC20.96■□□□□ 0.95
Clip1Q922J3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC20.96■□□□□ 0.95
Clip1Q922J3 Gm5637-201ENSMUST00000153890 1119 ntBASIC20.96■□□□□ 0.95
Clip1Q922J3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clip1Q922J3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC20.96■□□□□ 0.95
Clip1Q922J3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Clip1Q922J3 Gm2991-201ENSMUST00000173338 480 ntBASIC20.96■□□□□ 0.95
Clip1Q922J3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clip1Q922J3 Gm32025-201ENSMUST00000217960 307 ntBASIC20.96■□□□□ 0.95
Clip1Q922J3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC20.96■□□□□ 0.95
Clip1Q922J3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Clip1Q922J3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Clip1Q922J3 Gm37133-201ENSMUST00000192705 1922 ntBASIC20.96■□□□□ 0.95
Clip1Q922J3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clip1Q922J3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
Clip1Q922J3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Clip1Q922J3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clip1Q922J3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clip1Q922J3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clip1Q922J3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clip1Q922J3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clip1Q922J3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clip1Q922J3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clip1Q922J3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clip1Q922J3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clip1Q922J3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clip1Q922J3 Gm18056-201ENSMUST00000207670 568 ntBASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms