Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Trex1Q91XB0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Gm11793-201ENSMUST00000120433 981 ntBASIC15.41■□□□□ 0.06
Trex1Q91XB0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Gm6222-202ENSMUST00000182143 629 ntBASIC15.41■□□□□ 0.06
Trex1Q91XB0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.4■□□□□ 0.06
Trex1Q91XB0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Gm2231-201ENSMUST00000125661 612 ntBASIC15.4■□□□□ 0.06
Trex1Q91XB0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.4■□□□□ 0.06
Trex1Q91XB0 Gm42627-201ENSMUST00000197347 224 ntBASIC15.4■□□□□ 0.06
Trex1Q91XB0 Gm43822-201ENSMUST00000200285 476 ntBASIC15.4■□□□□ 0.06
Trex1Q91XB0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trex1Q91XB0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
Trex1Q91XB0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trex1Q91XB0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trex1Q91XB0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.39■□□□□ 0.05
Trex1Q91XB0 Gm16479-201ENSMUST00000121706 932 ntBASIC15.39■□□□□ 0.05
Trex1Q91XB0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.39■□□□□ 0.05
Trex1Q91XB0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trex1Q91XB0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.39■□□□□ 0.05
Trex1Q91XB0 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.39■□□□□ 0.05
Trex1Q91XB0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trex1Q91XB0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms