Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Gm16177-201ENSMUST00000120728 718 ntBASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Gm10156-201ENSMUST00000122364 462 ntBASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx39aQ8VDW0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
Ddx39aQ8VDW0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Gm8213-201ENSMUST00000118191 441 ntBASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Gm10478-201ENSMUST00000084451 396 ntBASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx39aQ8VDW0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx39aQ8VDW0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Ddx39aQ8VDW0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx39aQ8VDW0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx39aQ8VDW0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx39aQ8VDW0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.96□□□□□ -0.02
Ddx39aQ8VDW0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx39aQ8VDW0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx39aQ8VDW0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx39aQ8VDW0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx39aQ8VDW0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx39aQ8VDW0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ddx39aQ8VDW0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx39aQ8VDW0 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.95□□□□□ -0.02
Ddx39aQ8VDW0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx39aQ8VDW0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.95□□□□□ -0.02
Ddx39aQ8VDW0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx39aQ8VDW0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx39aQ8VDW0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx39aQ8VDW0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx39aQ8VDW0 Gm12384-201ENSMUST00000119228 919 ntBASIC14.95□□□□□ -0.02
Ddx39aQ8VDW0 Gm13369-201ENSMUST00000119442 987 ntBASIC14.95□□□□□ -0.02
Ddx39aQ8VDW0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx39aQ8VDW0 Gm27572-201ENSMUST00000183702 255 ntBASIC14.95□□□□□ -0.02
Ddx39aQ8VDW0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.95□□□□□ -0.02
Ddx39aQ8VDW0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms