Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdt1Q8R4E9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.12□□□□□ -0.31
Cdt1Q8R4E9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdt1Q8R4E9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.12□□□□□ -0.31
Cdt1Q8R4E9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdt1Q8R4E9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdt1Q8R4E9 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.12□□□□□ -0.31
Cdt1Q8R4E9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdt1Q8R4E9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Gm12390-201ENSMUST00000117897 397 ntBASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdt1Q8R4E9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Gm27839-201ENSMUST00000184242 106 ntBASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Gm17795-201ENSMUST00000214505 757 ntBASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdt1Q8R4E9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Grk6-205ENSMUST00000224653 2976 ntBASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdt1Q8R4E9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms