Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Atp2a1Q8R429 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.07■□□□□ 0
Atp2a1Q8R429 Gm13392-201ENSMUST00000117708 150 ntBASIC15.07■□□□□ 0
Atp2a1Q8R429 Gm12384-201ENSMUST00000119228 919 ntBASIC15.07■□□□□ 0
Atp2a1Q8R429 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.07■□□□□ 0
Atp2a1Q8R429 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.07■□□□□ 0
Atp2a1Q8R429 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Atp2a1Q8R429 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Atp2a1Q8R429 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.07■□□□□ 0
Atp2a1Q8R429 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
Atp2a1Q8R429 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Atp2a1Q8R429 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.06■□□□□ 0
Atp2a1Q8R429 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Atp2a1Q8R429 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.06■□□□□ 0
Atp2a1Q8R429 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Atp2a1Q8R429 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Atp2a1Q8R429 Gm8810-201ENSMUST00000172895 754 ntBASIC15.06■□□□□ 0
Atp2a1Q8R429 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.06■□□□□ 0
Atp2a1Q8R429 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.06■□□□□ 0
Atp2a1Q8R429 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.06■□□□□ 0
Atp2a1Q8R429 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Atp2a1Q8R429 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.06■□□□□ 0
Atp2a1Q8R429 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.06■□□□□ 0
Atp2a1Q8R429 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Atp2a1Q8R429 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atp2a1Q8R429 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.05■□□□□ 0
Atp2a1Q8R429 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atp2a1Q8R429 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atp2a1Q8R429 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.05■□□□□ 0
Atp2a1Q8R429 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.05■□□□□ 0
Atp2a1Q8R429 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Atp2a1Q8R429 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Atp2a1Q8R429 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atp2a1Q8R429 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Atp2a1Q8R429 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Atp2a1Q8R429 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atp2a1Q8R429 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.05■□□□□ -0
Atp2a1Q8R429 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.05■□□□□ -0
Atp2a1Q8R429 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.05■□□□□ -0
Atp2a1Q8R429 Gm16177-201ENSMUST00000120728 718 ntBASIC15.05■□□□□ -0
Atp2a1Q8R429 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.05■□□□□ -0
Atp2a1Q8R429 Gm29608-201ENSMUST00000190444 463 ntBASIC15.05■□□□□ -0
Atp2a1Q8R429 Gm43818-201ENSMUST00000200605 466 ntBASIC15.05■□□□□ -0
Atp2a1Q8R429 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.05■□□□□ -0
Atp2a1Q8R429 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atp2a1Q8R429 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.05■□□□□ -0
Atp2a1Q8R429 Gm26315-201ENSMUST00000083890 321 ntBASIC15.05■□□□□ -0
Atp2a1Q8R429 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Atp2a1Q8R429 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Atp2a1Q8R429 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Atp2a1Q8R429 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atp2a1Q8R429 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atp2a1Q8R429 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atp2a1Q8R429 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Atp2a1Q8R429 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Atp2a1Q8R429 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.04■□□□□ -0
Atp2a1Q8R429 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atp2a1Q8R429 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atp2a1Q8R429 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atp2a1Q8R429 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atp2a1Q8R429 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Atp2a1Q8R429 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atp2a1Q8R429 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms