Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Gm15678-201ENSMUST00000117573 960 ntBASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Gm13689-201ENSMUST00000119360 685 ntBASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Gm12403-201ENSMUST00000121384 959 ntBASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Gm12091-201ENSMUST00000146791 830 ntBASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Gm8515-201ENSMUST00000194852 576 ntBASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sf3a1Q8K4Z5 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sf3a1Q8K4Z5 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sf3a1Q8K4Z5 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sf3a1Q8K4Z5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sf3a1Q8K4Z5 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sf3a1Q8K4Z5 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sf3a1Q8K4Z5 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sf3a1Q8K4Z5 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.52■□□□□ 0.23
Sf3a1Q8K4Z5 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sf3a1Q8K4Z5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sf3a1Q8K4Z5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sf3a1Q8K4Z5 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sf3a1Q8K4Z5 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms