Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 BC001981-202ENSMUST00000191393 1545 ntBASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Gm18027-201ENSMUST00000218947 619 ntBASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Ebf4Q8K4J2 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.27□□□□□ -0.44
Ebf4Q8K4J2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ebf4Q8K4J2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ebf4Q8K4J2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.27□□□□□ -0.44
Ebf4Q8K4J2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ebf4Q8K4J2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.27□□□□□ -0.44
Ebf4Q8K4J2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ebf4Q8K4J2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ebf4Q8K4J2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ebf4Q8K4J2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ebf4Q8K4J2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ebf4Q8K4J2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ebf4Q8K4J2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ebf4Q8K4J2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Mzt1-203ENSMUST00000227948 952 ntBASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Mir497b-201ENSMUST00000093601 125 ntBASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf4Q8K4J2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Gm7862-201ENSMUST00000121461 292 ntBASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 AA543401-201ENSMUST00000164248 1269 ntBASIC12.26□□□□□ -0.45
Ebf4Q8K4J2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms