Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf39Q8K2Z2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf39Q8K2Z2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.02□□□□□ -0.16
Prpf39Q8K2Z2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf39Q8K2Z2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf39Q8K2Z2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf39Q8K2Z2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf39Q8K2Z2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf39Q8K2Z2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Prpf39Q8K2Z2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf39Q8K2Z2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf39Q8K2Z2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf39Q8K2Z2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf39Q8K2Z2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Prpf39Q8K2Z2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Gm38144-201ENSMUST00000192790 465 ntBASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Gm18624-201ENSMUST00000220966 658 ntBASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf39Q8K2Z2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf39Q8K2Z2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Gm14371-201ENSMUST00000138925 1518 ntBASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14□□□□□ -0.17
Prpf39Q8K2Z2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf39Q8K2Z2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms