Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Gm11025-201ENSMUST00000140773 466 ntBASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Gm37714-201ENSMUST00000194742 342 ntBASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Gm18057-201ENSMUST00000208220 503 ntBASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Mir8117-201ENSMUST00000184773 107 ntBASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Gm45453-201ENSMUST00000211758 853 ntBASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc28bQ8CEG5 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc28bQ8CEG5 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.33□□□□□ -0.27
Ccdc28bQ8CEG5 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Gm9727-201ENSMUST00000161387 555 ntBASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc28bQ8CEG5 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms