Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Gm13342-201ENSMUST00000121055 207 ntBASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Gm7584-201ENSMUST00000175829 940 ntBASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Gm43758-201ENSMUST00000199500 367 ntBASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim52Q8CDV4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Gm12539-201ENSMUST00000121549 1098 ntBASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Gm7783-201ENSMUST00000204795 781 ntBASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Gm8227-201ENSMUST00000223306 571 ntBASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim52Q8CDV4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Gm13350-201ENSMUST00000120519 479 ntBASIC16.54■□□□□ 0.24
Trim52Q8CDV4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Gm32025-201ENSMUST00000217960 307 ntBASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Gm9368-201ENSMUST00000219348 831 ntBASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim52Q8CDV4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim52Q8CDV4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim52Q8CDV4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim52Q8CDV4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim52Q8CDV4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim52Q8CDV4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim52Q8CDV4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim52Q8CDV4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trim52Q8CDV4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim52Q8CDV4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim52Q8CDV4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim52Q8CDV4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms