Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Gm24543-201ENSMUST00000103867 82 ntBASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Gm13453-201ENSMUST00000118708 357 ntBASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Gm27631-201ENSMUST00000184163 466 ntBASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Mir125a-201ENSMUST00000083545 68 ntBASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc87Q8CDL9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Gm14057-201ENSMUST00000120631 482 ntBASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Ccdc87Q8CDL9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc87Q8CDL9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Mir698-201ENSMUST00000102164 109 ntBASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Gm27533-201ENSMUST00000183800 152 ntBASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Syt7-205ENSMUST00000224135 1557 ntBASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc87Q8CDL9 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms