Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Gm10175-201ENSMUST00000086013 645 ntBASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd4Q8CC84 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Mir1895-201ENSMUST00000122615 79 ntBASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Gm27494-201ENSMUST00000184735 189 ntBASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Gm8000-201ENSMUST00000188378 592 ntBASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Gm44771-201ENSMUST00000206975 626 ntBASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lysmd4Q8CC84 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Gm8927-201ENSMUST00000181978 981 ntBASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Gm3222-201ENSMUST00000071282 990 ntBASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lysmd4Q8CC84 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms