Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Gm27341-201ENSMUST00000183570 106 ntBASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a6Q8C6K9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Mir698-201ENSMUST00000102164 109 ntBASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a6Q8C6K9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a6Q8C6K9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.15□□□□□ -0.47
Col6a6Q8C6K9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.15□□□□□ -0.47
Col6a6Q8C6K9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Col6a6Q8C6K9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms