Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp44Q8C2S0 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Gm6447-201ENSMUST00000118905 835 ntBASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Gm12091-201ENSMUST00000146791 830 ntBASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Mir7221-201ENSMUST00000184009 72 ntBASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Gm8515-201ENSMUST00000194852 576 ntBASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp44Q8C2S0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp44Q8C2S0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.77■□□□□ 0.12
Usp44Q8C2S0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms