Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Ska3Q8C263 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska3Q8C263 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.73□□□□□ -0.37
Ska3Q8C263 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ska3Q8C263 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska3Q8C263 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ska3Q8C263 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska3Q8C263 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska3Q8C263 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska3Q8C263 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ska3Q8C263 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.72□□□□□ -0.37
Ska3Q8C263 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ska3Q8C263 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ska3Q8C263 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.72□□□□□ -0.37
Ska3Q8C263 Gm12485-201ENSMUST00000119641 291 ntBASIC12.72□□□□□ -0.37
Ska3Q8C263 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.72□□□□□ -0.37
Ska3Q8C263 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ska3Q8C263 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Gm15823-201ENSMUST00000064305 670 ntBASIC12.72□□□□□ -0.37
Ska3Q8C263 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ska3Q8C263 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.72□□□□□ -0.37
Ska3Q8C263 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.72□□□□□ -0.37
Ska3Q8C263 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
Ska3Q8C263 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ska3Q8C263 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.72□□□□□ -0.37
Ska3Q8C263 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska3Q8C263 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ska3Q8C263 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ska3Q8C263 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska3Q8C263 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ska3Q8C263 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ska3Q8C263 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska3Q8C263 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska3Q8C263 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ska3Q8C263 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska3Q8C263 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska3Q8C263 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska3Q8C263 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ska3Q8C263 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska3Q8C263 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska3Q8C263 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ska3Q8C263 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ska3Q8C263 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ska3Q8C263 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ska3Q8C263 Gm26464-201ENSMUST00000157094 305 ntBASIC12.71□□□□□ -0.37
Ska3Q8C263 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.71□□□□□ -0.37
Ska3Q8C263 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ska3Q8C263 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.71□□□□□ -0.37
Ska3Q8C263 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.71□□□□□ -0.37
Ska3Q8C263 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.71□□□□□ -0.37
Ska3Q8C263 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ska3Q8C263 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ska3Q8C263 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska3Q8C263 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ska3Q8C263 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ska3Q8C263 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ska3Q8C263 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ska3Q8C263 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ska3Q8C263 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ska3Q8C263 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ska3Q8C263 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ska3Q8C263 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ska3Q8C263 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Ska3Q8C263 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Ska3Q8C263 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ska3Q8C263 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ska3Q8C263 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ska3Q8C263 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ska3Q8C263 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ska3Q8C263 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.7□□□□□ -0.38
Ska3Q8C263 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Ska3Q8C263 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ska3Q8C263 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms