Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Gm14719-201ENSMUST00000121891 340 ntBASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Gm25927-201ENSMUST00000175058 117 ntBASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Gm27838-201ENSMUST00000184829 128 ntBASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trerf1Q8BXJ2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trerf1Q8BXJ2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Gm4875-201ENSMUST00000118257 786 ntBASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Gm18027-201ENSMUST00000218947 619 ntBASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trerf1Q8BXJ2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms