Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.07□□□□□ -0.32
Rnf38Q8BI21 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Gm27430-201ENSMUST00000184585 107 ntBASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Gm21470-201ENSMUST00000187680 696 ntBASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Gm44333-201ENSMUST00000197168 107 ntBASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Gm44719-201ENSMUST00000206404 149 ntBASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Rnf38Q8BI21 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Gm27533-201ENSMUST00000183800 152 ntBASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Gm38294-201ENSMUST00000192831 381 ntBASIC13.06□□□□□ -0.32
Rnf38Q8BI21 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.06□□□□□ -0.32
Rnf38Q8BI21 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf38Q8BI21 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Gm13616-201ENSMUST00000120600 222 ntBASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms