Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim62Q80V85 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim62Q80V85 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim62Q80V85 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Trim62Q80V85 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim62Q80V85 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim62Q80V85 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Trim62Q80V85 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Trim62Q80V85 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim62Q80V85 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Trim62Q80V85 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim62Q80V85 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.96□□□□□ -0.17
Trim62Q80V85 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.96□□□□□ -0.17
Trim62Q80V85 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim62Q80V85 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.96□□□□□ -0.17
Trim62Q80V85 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim62Q80V85 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Gm8463-201ENSMUST00000208573 613 ntBASIC13.96□□□□□ -0.17
Trim62Q80V85 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim62Q80V85 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.96□□□□□ -0.17
Trim62Q80V85 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.96□□□□□ -0.17
Trim62Q80V85 Itm2b-204ENSMUST00000228637 783 ntBASIC13.96□□□□□ -0.17
Trim62Q80V85 Gm5356-201ENSMUST00000093326 615 ntBASIC13.96□□□□□ -0.17
Trim62Q80V85 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim62Q80V85 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trim62Q80V85 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim62Q80V85 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim62Q80V85 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trim62Q80V85 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim62Q80V85 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim62Q80V85 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim62Q80V85 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim62Q80V85 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.96□□□□□ -0.18
Trim62Q80V85 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim62Q80V85 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim62Q80V85 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim62Q80V85 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.95□□□□□ -0.18
Trim62Q80V85 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim62Q80V85 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Gm11424-201ENSMUST00000121929 829 ntBASIC13.95□□□□□ -0.18
Trim62Q80V85 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Gm29608-201ENSMUST00000190444 463 ntBASIC13.95□□□□□ -0.18
Trim62Q80V85 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.95□□□□□ -0.18
Trim62Q80V85 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.95□□□□□ -0.18
Trim62Q80V85 Gm7653-201ENSMUST00000214567 508 ntBASIC13.95□□□□□ -0.18
Trim62Q80V85 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim62Q80V85 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trim62Q80V85 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim62Q80V85 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trim62Q80V85 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim62Q80V85 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim62Q80V85 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim62Q80V85 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim62Q80V85 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trim62Q80V85 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim62Q80V85 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trim62Q80V85 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trim62Q80V85 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim62Q80V85 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim62Q80V85 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trim62Q80V85 Gm5687-201ENSMUST00000118252 640 ntBASIC13.94□□□□□ -0.18
Trim62Q80V85 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim62Q80V85 Gm6152-201ENSMUST00000151704 340 ntBASIC13.94□□□□□ -0.18
Trim62Q80V85 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms