Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf38bQ80SY5 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Mir877-201ENSMUST00000104738 85 ntBASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Gm24196-201ENSMUST00000179161 110 ntBASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Gm19891-201ENSMUST00000189771 303 ntBASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Gm43818-201ENSMUST00000200605 466 ntBASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Gm40466-201ENSMUST00000212174 422 ntBASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf38bQ80SY5 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Gm12928-201ENSMUST00000117115 573 ntBASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Gm26083-201ENSMUST00000157904 193 ntBASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Gm10275-202ENSMUST00000168697 495 ntBASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Gm10275-201ENSMUST00000092620 635 ntBASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.16□□□□□ -0.14
Prpf38bQ80SY5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Gm15782-201ENSMUST00000121073 445 ntBASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Gm19309-201ENSMUST00000218295 205 ntBASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms