Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Gm38671-201ENSMUST00000200573 130 ntBASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Acot6-202ENSMUST00000222921 3622 ntBASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd1Q6PIP5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Gm8652-201ENSMUST00000181363 964 ntBASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd1Q6PIP5 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Gm29127-201ENSMUST00000188304 517 ntBASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms