Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Morn2-202ENSMUST00000227729 656 ntBASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.65■□□□□ 0.1
Nup98Q6PFD9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Nup98Q6PFD9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Gm15808-201ENSMUST00000119046 604 ntBASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Gm18827-201ENSMUST00000188341 790 ntBASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup98Q6PFD9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Gm37489-201ENSMUST00000191883 159 ntBASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Nup98Q6PFD9 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Gm14381-201ENSMUST00000122105 414 ntBASIC15.62■□□□□ 0.09
Nup98Q6PFD9 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Gm8099-201ENSMUST00000200510 742 ntBASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Mir339-201ENSMUST00000083659 96 ntBASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Nup98Q6PFD9 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms