Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.38□□□□□ -0.11
CtifQ6PEE2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.37□□□□□ -0.11
CtifQ6PEE2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.37□□□□□ -0.11
CtifQ6PEE2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.37□□□□□ -0.11
CtifQ6PEE2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.37□□□□□ -0.11
CtifQ6PEE2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtifQ6PEE2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.36□□□□□ -0.11
CtifQ6PEE2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Mir874-201ENSMUST00000104769 76 ntBASIC14.36□□□□□ -0.11
CtifQ6PEE2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.36□□□□□ -0.11
CtifQ6PEE2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Gm12644-201ENSMUST00000119935 606 ntBASIC14.36□□□□□ -0.11
CtifQ6PEE2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CtifQ6PEE2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Gm45011-201ENSMUST00000207620 2297 ntBASIC14.36□□□□□ -0.11
CtifQ6PEE2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CtifQ6PEE2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.35□□□□□ -0.11
CtifQ6PEE2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.35□□□□□ -0.11
CtifQ6PEE2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.35□□□□□ -0.11
CtifQ6PEE2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms