Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Gm12485-201ENSMUST00000119641 291 ntBASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Mir1938-201ENSMUST00000158746 100 ntBASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Gm26464-201ENSMUST00000157094 305 ntBASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Gm8463-201ENSMUST00000208573 613 ntBASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb4Q6P8W9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Gm12742-201ENSMUST00000117326 410 ntBASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb4Q6P8W9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms