Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.7□□□□□ -0.22
Casc4Q6P2L7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Casc4Q6P2L7 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.69□□□□□ -0.22
Casc4Q6P2L7 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Casc4Q6P2L7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Gm37917-201ENSMUST00000194711 392 ntBASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.68□□□□□ -0.22
Casc4Q6P2L7 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms