Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.73□□□□□ -0.21
Sp140Q6NSQ5 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Gm44872-201ENSMUST00000207864 420 ntBASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Gm20445-201ENSMUST00000061905 565 ntBASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sp140Q6NSQ5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sp140Q6NSQ5 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sp140Q6NSQ5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Sp140Q6NSQ5 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.71□□□□□ -0.22
Sp140Q6NSQ5 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Sp140Q6NSQ5 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sp140Q6NSQ5 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sp140Q6NSQ5 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.71□□□□□ -0.22
Sp140Q6NSQ5 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Gm14719-201ENSMUST00000121891 340 ntBASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Gm25925-201ENSMUST00000158314 306 ntBASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Gm27838-201ENSMUST00000184829 128 ntBASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Gm27772-201ENSMUST00000184900 187 ntBASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms