Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a2Q64739 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.97■□□□□ 0.15
Col11a2Q64739 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a2Q64739 Gm11597-201ENSMUST00000121423 964 ntBASIC15.97■□□□□ 0.15
Col11a2Q64739 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC15.97■□□□□ 0.15
Col11a2Q64739 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC15.97■□□□□ 0.15
Col11a2Q64739 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.97■□□□□ 0.15
Col11a2Q64739 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Col11a2Q64739 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a2Q64739 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a2Q64739 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Col11a2Q64739 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Col11a2Q64739 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a2Q64739 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Col11a2Q64739 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a2Q64739 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a2Q64739 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a2Q64739 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a2Q64739 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a2Q64739 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a2Q64739 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a2Q64739 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a2Q64739 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a2Q64739 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.96■□□□□ 0.15
Col11a2Q64739 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC15.96■□□□□ 0.15
Col11a2Q64739 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Col11a2Q64739 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Col11a2Q64739 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a2Q64739 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC15.96■□□□□ 0.15
Col11a2Q64739 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC15.96■□□□□ 0.15
Col11a2Q64739 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC15.96■□□□□ 0.15
Col11a2Q64739 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a2Q64739 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Col11a2Q64739 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Col11a2Q64739 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.96■□□□□ 0.14
Col11a2Q64739 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col11a2Q64739 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.96■□□□□ 0.14
Col11a2Q64739 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Col11a2Q64739 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Col11a2Q64739 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Col11a2Q64739 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC15.95■□□□□ 0.14
Col11a2Q64739 Gm12058-201ENSMUST00000118614 437 ntBASIC15.95■□□□□ 0.14
Col11a2Q64739 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 AC140293.1-201ENSMUST00000225626 1247 ntBASIC15.95■□□□□ 0.14
Col11a2Q64739 AC125209.1-201ENSMUST00000225812 766 ntBASIC15.95■□□□□ 0.14
Col11a2Q64739 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Col11a2Q64739 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.95■□□□□ 0.14
Col11a2Q64739 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Col11a2Q64739 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a2Q64739 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Col11a2Q64739 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Col11a2Q64739 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
Col11a2Q64739 Gm32999-201ENSMUST00000192693 562 ntBASIC15.94■□□□□ 0.14
Col11a2Q64739 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Col11a2Q64739 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.94■□□□□ 0.14
Col11a2Q64739 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Col11a2Q64739 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC15.94■□□□□ 0.14
Col11a2Q64739 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.94■□□□□ 0.14
Col11a2Q64739 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC15.94■□□□□ 0.14
Col11a2Q64739 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.94■□□□□ 0.14
Col11a2Q64739 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms