Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn1Q64347 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn1Q64347 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn1Q64347 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
Clcn1Q64347 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn1Q64347 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Clcn1Q64347 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Clcn1Q64347 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC17.09■□□□□ 0.33
Clcn1Q64347 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Clcn1Q64347 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.09■□□□□ 0.33
Clcn1Q64347 Gm18934-201ENSMUST00000216671 1044 ntBASIC17.09■□□□□ 0.33
Clcn1Q64347 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.09■□□□□ 0.33
Clcn1Q64347 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Clcn1Q64347 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.09■□□□□ 0.33
Clcn1Q64347 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn1Q64347 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn1Q64347 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Clcn1Q64347 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Clcn1Q64347 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn1Q64347 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn1Q64347 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn1Q64347 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Clcn1Q64347 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Clcn1Q64347 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.08■□□□□ 0.33
Clcn1Q64347 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Clcn1Q64347 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn1Q64347 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn1Q64347 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC17.08■□□□□ 0.32
Clcn1Q64347 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC17.08■□□□□ 0.32
Clcn1Q64347 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn1Q64347 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Clcn1Q64347 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn1Q64347 Gm6334-201ENSMUST00000207083 228 ntBASIC17.08■□□□□ 0.32
Clcn1Q64347 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn1Q64347 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.08■□□□□ 0.32
Clcn1Q64347 Tyms-ps-201ENSMUST00000219550 915 ntBASIC17.08■□□□□ 0.32
Clcn1Q64347 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Clcn1Q64347 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn1Q64347 Gm10146-201ENSMUST00000072739 309 ntBASIC17.08■□□□□ 0.32
Clcn1Q64347 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.08■□□□□ 0.32
Clcn1Q64347 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn1Q64347 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn1Q64347 Gm43364-201ENSMUST00000196046 3274 ntBASIC17.08■□□□□ 0.32
Clcn1Q64347 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn1Q64347 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn1Q64347 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clcn1Q64347 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn1Q64347 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn1Q64347 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC17.07■□□□□ 0.32
Clcn1Q64347 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC17.07■□□□□ 0.32
Clcn1Q64347 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clcn1Q64347 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn1Q64347 Gm15770-201ENSMUST00000117498 584 ntBASIC17.07■□□□□ 0.32
Clcn1Q64347 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC17.07■□□□□ 0.32
Clcn1Q64347 Gm18827-201ENSMUST00000188341 790 ntBASIC17.07■□□□□ 0.32
Clcn1Q64347 Gm37497-201ENSMUST00000195830 798 ntBASIC17.07■□□□□ 0.32
Clcn1Q64347 Gm18056-201ENSMUST00000207670 568 ntBASIC17.07■□□□□ 0.32
Clcn1Q64347 Gm18061-201ENSMUST00000208350 562 ntBASIC17.07■□□□□ 0.32
Clcn1Q64347 Gm18063-201ENSMUST00000208529 568 ntBASIC17.07■□□□□ 0.32
Clcn1Q64347 Gm18052-201ENSMUST00000208750 559 ntBASIC17.07■□□□□ 0.32
Clcn1Q64347 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn1Q64347 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
Clcn1Q64347 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clcn1Q64347 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.07■□□□□ 0.32
Clcn1Q64347 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn1Q64347 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn1Q64347 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn1Q64347 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clcn1Q64347 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn1Q64347 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn1Q64347 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Clcn1Q64347 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.07■□□□□ 0.32
Clcn1Q64347 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn1Q64347 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Clcn1Q64347 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn1Q64347 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Clcn1Q64347 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms