Protein–RNA interactions for Protein: Q62471

Lcn3, Vomeronasal secretory protein 1, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcn3Q62471 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.72□□□□□ -0.53
Lcn3Q62471 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.72□□□□□ -0.53
Lcn3Q62471 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lcn3Q62471 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Lcn3Q62471 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.72□□□□□ -0.53
Lcn3Q62471 Gm14042-201ENSMUST00000120139 833 ntBASIC11.72□□□□□ -0.53
Lcn3Q62471 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.72□□□□□ -0.53
Lcn3Q62471 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.72□□□□□ -0.53
Lcn3Q62471 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Lcn3Q62471 Gm7230-201ENSMUST00000173026 815 ntBASIC11.72□□□□□ -0.53
Lcn3Q62471 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.72□□□□□ -0.53
Lcn3Q62471 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Lcn3Q62471 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lcn3Q62471 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Lcn3Q62471 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.71□□□□□ -0.53
Lcn3Q62471 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.71□□□□□ -0.53
Lcn3Q62471 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lcn3Q62471 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.71□□□□□ -0.53
Lcn3Q62471 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.71□□□□□ -0.53
Lcn3Q62471 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.71□□□□□ -0.53
Lcn3Q62471 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.71□□□□□ -0.53
Lcn3Q62471 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 Rps4l-201ENSMUST00000071745 943 ntBASIC11.71□□□□□ -0.53
Lcn3Q62471 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lcn3Q62471 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.71□□□□□ -0.54
Lcn3Q62471 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Lcn3Q62471 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lcn3Q62471 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lcn3Q62471 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lcn3Q62471 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lcn3Q62471 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Lcn3Q62471 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lcn3Q62471 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lcn3Q62471 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lcn3Q62471 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Lcn3Q62471 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.71□□□□□ -0.54
Lcn3Q62471 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lcn3Q62471 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Lcn3Q62471 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lcn3Q62471 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Lcn3Q62471 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.7□□□□□ -0.54
Lcn3Q62471 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.7□□□□□ -0.54
Lcn3Q62471 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lcn3Q62471 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lcn3Q62471 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms