Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
AtmQ62388 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
AtmQ62388 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
AtmQ62388 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.48□□□□□ -0.41
AtmQ62388 Gm25043-201ENSMUST00000158604 212 ntBASIC12.48□□□□□ -0.41
AtmQ62388 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
AtmQ62388 Gm25951-201ENSMUST00000175330 64 ntBASIC12.48□□□□□ -0.41
AtmQ62388 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
AtmQ62388 Gm6458-201ENSMUST00000211573 635 ntBASIC12.48□□□□□ -0.41
AtmQ62388 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
AtmQ62388 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
AtmQ62388 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
AtmQ62388 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.48□□□□□ -0.41
AtmQ62388 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.48□□□□□ -0.41
AtmQ62388 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.48□□□□□ -0.41
AtmQ62388 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.48□□□□□ -0.41
AtmQ62388 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.48□□□□□ -0.41
AtmQ62388 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.48□□□□□ -0.41
AtmQ62388 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
AtmQ62388 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Gm25880-201ENSMUST00000104331 132 ntBASIC12.47□□□□□ -0.41
AtmQ62388 Gm13996-201ENSMUST00000118456 430 ntBASIC12.47□□□□□ -0.41
AtmQ62388 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
AtmQ62388 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
AtmQ62388 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Gm13045-201ENSMUST00000119019 712 ntBASIC12.47□□□□□ -0.41
AtmQ62388 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
AtmQ62388 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
AtmQ62388 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.47□□□□□ -0.41
AtmQ62388 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AtmQ62388 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AtmQ62388 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AtmQ62388 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
AtmQ62388 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
AtmQ62388 Gm42779-201ENSMUST00000198807 406 ntBASIC12.46□□□□□ -0.41
AtmQ62388 Gm44405-201ENSMUST00000198952 126 ntBASIC12.46□□□□□ -0.41
AtmQ62388 Gm43916-201ENSMUST00000205062 967 ntBASIC12.46□□□□□ -0.41
AtmQ62388 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.46□□□□□ -0.41
AtmQ62388 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AtmQ62388 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AtmQ62388 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
AtmQ62388 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AtmQ62388 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AtmQ62388 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
AtmQ62388 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AtmQ62388 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AtmQ62388 Gm26361-201ENSMUST00000158868 186 ntBASIC12.46□□□□□ -0.41
AtmQ62388 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AtmQ62388 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms