Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ctr9Q62018 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ctr9Q62018 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ctr9Q62018 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ctr9Q62018 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ctr9Q62018 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.92■□□□□ 0.14
Ctr9Q62018 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ctr9Q62018 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ctr9Q62018 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ctr9Q62018 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ctr9Q62018 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ctr9Q62018 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ctr9Q62018 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ctr9Q62018 Gm10012-201ENSMUST00000078252 192 ntBASIC15.92■□□□□ 0.14
Ctr9Q62018 Gm25857-201ENSMUST00000082788 129 ntBASIC15.92■□□□□ 0.14
Ctr9Q62018 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ctr9Q62018 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ctr9Q62018 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ctr9Q62018 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ctr9Q62018 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ctr9Q62018 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.92■□□□□ 0.14
Ctr9Q62018 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ctr9Q62018 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.91■□□□□ 0.14
Ctr9Q62018 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.91■□□□□ 0.14
Ctr9Q62018 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
Ctr9Q62018 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Gm11814-201ENSMUST00000119515 929 ntBASIC15.91■□□□□ 0.14
Ctr9Q62018 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Ctr9Q62018 Gm38671-201ENSMUST00000200573 130 ntBASIC15.91■□□□□ 0.14
Ctr9Q62018 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ctr9Q62018 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.91■□□□□ 0.14
Ctr9Q62018 Gm18473-201ENSMUST00000220543 868 ntBASIC15.91■□□□□ 0.14
Ctr9Q62018 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.91■□□□□ 0.14
Ctr9Q62018 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.91■□□□□ 0.14
Ctr9Q62018 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ctr9Q62018 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ctr9Q62018 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ctr9Q62018 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ctr9Q62018 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ctr9Q62018 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ctr9Q62018 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ctr9Q62018 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ctr9Q62018 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ctr9Q62018 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ctr9Q62018 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ctr9Q62018 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ctr9Q62018 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ctr9Q62018 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ctr9Q62018 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ctr9Q62018 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Ctr9Q62018 Gm5687-201ENSMUST00000118252 640 ntBASIC15.9■□□□□ 0.14
Ctr9Q62018 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.9■□□□□ 0.14
Ctr9Q62018 Gm7561-201ENSMUST00000211203 886 ntBASIC15.9■□□□□ 0.14
Ctr9Q62018 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.9■□□□□ 0.14
Ctr9Q62018 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ctr9Q62018 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ctr9Q62018 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ctr9Q62018 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.9■□□□□ 0.14
Ctr9Q62018 Gm26315-201ENSMUST00000083890 321 ntBASIC15.9■□□□□ 0.14
Ctr9Q62018 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.9■□□□□ 0.14
Ctr9Q62018 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ctr9Q62018 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.9■□□□□ 0.14
Ctr9Q62018 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.9■□□□□ 0.14
Ctr9Q62018 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.9■□□□□ 0.14
Ctr9Q62018 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ctr9Q62018 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ctr9Q62018 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ctr9Q62018 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ctr9Q62018 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Ctr9Q62018 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ctr9Q62018 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ctr9Q62018 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms