Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Notch3Q61982 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Notch3Q61982 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Notch3Q61982 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Notch3Q61982 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10.4□□□□□ -0.74
Notch3Q61982 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.4□□□□□ -0.74
Notch3Q61982 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Notch3Q61982 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Notch3Q61982 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Notch3Q61982 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Notch3Q61982 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Notch3Q61982 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Notch3Q61982 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Notch3Q61982 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Notch3Q61982 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Notch3Q61982 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Notch3Q61982 Gm12928-201ENSMUST00000117115 573 ntBASIC10.4□□□□□ -0.74
Notch3Q61982 Gm13689-201ENSMUST00000119360 685 ntBASIC10.4□□□□□ -0.74
Notch3Q61982 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.4□□□□□ -0.74
Notch3Q61982 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Notch3Q61982 Gm18827-201ENSMUST00000188341 790 ntBASIC10.4□□□□□ -0.74
Notch3Q61982 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.4□□□□□ -0.74
Notch3Q61982 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Notch3Q61982 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Notch3Q61982 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Notch3Q61982 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Notch3Q61982 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Notch3Q61982 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Notch3Q61982 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Notch3Q61982 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Notch3Q61982 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC10.39□□□□□ -0.75
Notch3Q61982 Gm42471-201ENSMUST00000201457 1865 ntBASIC10.39□□□□□ -0.75
Notch3Q61982 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.39□□□□□ -0.75
Notch3Q61982 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Gm27486-201ENSMUST00000184923 80 ntBASIC10.39□□□□□ -0.75
Notch3Q61982 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.39□□□□□ -0.75
Notch3Q61982 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.39□□□□□ -0.75
Notch3Q61982 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Notch3Q61982 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Notch3Q61982 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Notch3Q61982 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC10.39□□□□□ -0.75
Notch3Q61982 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.39□□□□□ -0.75
Notch3Q61982 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Gm5187-201ENSMUST00000117317 991 ntBASIC10.39□□□□□ -0.75
Notch3Q61982 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.39□□□□□ -0.75
Notch3Q61982 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Notch3Q61982 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Notch3Q61982 Gm27839-201ENSMUST00000184242 106 ntBASIC10.39□□□□□ -0.75
Notch3Q61982 Gm21470-201ENSMUST00000187680 696 ntBASIC10.39□□□□□ -0.75
Notch3Q61982 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.39□□□□□ -0.75
Notch3Q61982 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.39□□□□□ -0.75
Notch3Q61982 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Gm6091-201ENSMUST00000098307 165 ntBASIC10.39□□□□□ -0.75
Notch3Q61982 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Notch3Q61982 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC10.39□□□□□ -0.75
Notch3Q61982 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Notch3Q61982 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Notch3Q61982 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Notch3Q61982 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Notch3Q61982 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Notch3Q61982 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Notch3Q61982 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Notch3Q61982 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Notch3Q61982 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Notch3Q61982 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Notch3Q61982 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Notch3Q61982 Gm12882-201ENSMUST00000121696 517 ntBASIC10.38□□□□□ -0.75
Notch3Q61982 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Notch3Q61982 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.38□□□□□ -0.75
Notch3Q61982 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Notch3Q61982 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Notch3Q61982 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.38□□□□□ -0.75
Notch3Q61982 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Notch3Q61982 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms