Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Foxn1Q61575 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Foxn1Q61575 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Foxn1Q61575 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxn1Q61575 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxn1Q61575 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxn1Q61575 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.36■□□□□ 0.05
Foxn1Q61575 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Foxn1Q61575 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxn1Q61575 Gm5884-201ENSMUST00000036712 1479 ntBASIC15.36■□□□□ 0.05
Foxn1Q61575 Gm23270-201ENSMUST00000104055 131 ntBASIC15.36■□□□□ 0.05
Foxn1Q61575 Gm13665-201ENSMUST00000120830 528 ntBASIC15.36■□□□□ 0.05
Foxn1Q61575 Gm12363-201ENSMUST00000122250 668 ntBASIC15.36■□□□□ 0.05
Foxn1Q61575 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Foxn1Q61575 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Foxn1Q61575 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.36■□□□□ 0.05
Foxn1Q61575 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.36■□□□□ 0.05
Foxn1Q61575 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.36■□□□□ 0.05
Foxn1Q61575 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Foxn1Q61575 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxn1Q61575 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxn1Q61575 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxn1Q61575 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Foxn1Q61575 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Foxn1Q61575 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Foxn1Q61575 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.35■□□□□ 0.05
Foxn1Q61575 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Foxn1Q61575 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Foxn1Q61575 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC15.35■□□□□ 0.05
Foxn1Q61575 Gm5051-201ENSMUST00000204085 485 ntBASIC15.35■□□□□ 0.05
Foxn1Q61575 Gm44069-201ENSMUST00000204898 506 ntBASIC15.35■□□□□ 0.05
Foxn1Q61575 Gm4768-201ENSMUST00000206199 686 ntBASIC15.35■□□□□ 0.05
Foxn1Q61575 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.35■□□□□ 0.05
Foxn1Q61575 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Foxn1Q61575 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.35■□□□□ 0.05
Foxn1Q61575 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.35■□□□□ 0.05
Foxn1Q61575 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxn1Q61575 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.34■□□□□ 0.05
Foxn1Q61575 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Foxn1Q61575 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.34■□□□□ 0.05
Foxn1Q61575 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 Gm14665-201ENSMUST00000122294 557 ntBASIC15.34■□□□□ 0.05
Foxn1Q61575 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 AC140293.1-201ENSMUST00000225626 1247 ntBASIC15.34■□□□□ 0.05
Foxn1Q61575 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Foxn1Q61575 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Foxn1Q61575 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Foxn1Q61575 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.33■□□□□ 0.05
Foxn1Q61575 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Foxn1Q61575 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Foxn1Q61575 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxn1Q61575 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxn1Q61575 Gm23200-201ENSMUST00000104379 132 ntBASIC15.33■□□□□ 0.04
Foxn1Q61575 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxn1Q61575 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Foxn1Q61575 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.33■□□□□ 0.04
Foxn1Q61575 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Foxn1Q61575 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms