Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Smarcd1Q61466 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Smarcd1Q61466 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Gm24196-201ENSMUST00000179161 110 ntBASIC14.04□□□□□ -0.16
Smarcd1Q61466 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smarcd1Q61466 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.04□□□□□ -0.16
Smarcd1Q61466 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Gm8598-201ENSMUST00000221184 836 ntBASIC14.04□□□□□ -0.16
Smarcd1Q61466 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd1Q61466 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarcd1Q61466 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Gm13829-201ENSMUST00000119600 138 ntBASIC14.03□□□□□ -0.16
Smarcd1Q61466 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.03□□□□□ -0.16
Smarcd1Q61466 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.03□□□□□ -0.16
Smarcd1Q61466 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.03□□□□□ -0.16
Smarcd1Q61466 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.03□□□□□ -0.16
Smarcd1Q61466 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Gm10012-201ENSMUST00000078252 192 ntBASIC14.03□□□□□ -0.16
Smarcd1Q61466 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.03□□□□□ -0.16
Smarcd1Q61466 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smarcd1Q61466 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.03□□□□□ -0.16
Smarcd1Q61466 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd1Q61466 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd1Q61466 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms