Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sim1Q61045 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sim1Q61045 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sim1Q61045 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sim1Q61045 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sim1Q61045 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sim1Q61045 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sim1Q61045 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sim1Q61045 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Sim1Q61045 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.4□□□□□ -0.26
Sim1Q61045 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.4□□□□□ -0.26
Sim1Q61045 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.4□□□□□ -0.26
Sim1Q61045 Gm38671-201ENSMUST00000200573 130 ntBASIC13.4□□□□□ -0.26
Sim1Q61045 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.4□□□□□ -0.26
Sim1Q61045 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sim1Q61045 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.4□□□□□ -0.26
Sim1Q61045 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sim1Q61045 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sim1Q61045 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sim1Q61045 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.4□□□□□ -0.26
Sim1Q61045 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sim1Q61045 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sim1Q61045 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sim1Q61045 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.4□□□□□ -0.26
Sim1Q61045 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sim1Q61045 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sim1Q61045 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sim1Q61045 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sim1Q61045 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sim1Q61045 Mir698-201ENSMUST00000102164 109 ntBASIC13.39□□□□□ -0.27
Sim1Q61045 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.39□□□□□ -0.27
Sim1Q61045 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.39□□□□□ -0.27
Sim1Q61045 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.39□□□□□ -0.27
Sim1Q61045 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sim1Q61045 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Gm18905-201ENSMUST00000205454 928 ntBASIC13.39□□□□□ -0.27
Sim1Q61045 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.39□□□□□ -0.27
Sim1Q61045 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.39□□□□□ -0.27
Sim1Q61045 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sim1Q61045 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Sim1Q61045 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Sim1Q61045 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sim1Q61045 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sim1Q61045 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.39□□□□□ -0.27
Sim1Q61045 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.38□□□□□ -0.27
Sim1Q61045 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Gm14723-201ENSMUST00000118686 215 ntBASIC13.38□□□□□ -0.27
Sim1Q61045 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.38□□□□□ -0.27
Sim1Q61045 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.38□□□□□ -0.27
Sim1Q61045 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.38□□□□□ -0.27
Sim1Q61045 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.38□□□□□ -0.27
Sim1Q61045 Gm43818-201ENSMUST00000200605 466 ntBASIC13.38□□□□□ -0.27
Sim1Q61045 Gm45880-201ENSMUST00000213041 853 ntBASIC13.38□□□□□ -0.27
Sim1Q61045 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.38□□□□□ -0.27
Sim1Q61045 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.38□□□□□ -0.27
Sim1Q61045 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.38□□□□□ -0.27
Sim1Q61045 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.38□□□□□ -0.27
Sim1Q61045 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sim1Q61045 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms