Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm42550-201ENSMUST00000201553 960 ntBASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfaip3Q60769 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Gm44397-201ENSMUST00000195950 113 ntBASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Gm17794-201ENSMUST00000220252 955 ntBASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Gm5356-201ENSMUST00000093326 615 ntBASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Tnfaip3Q60769 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfaip3Q60769 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfaip3Q60769 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfaip3Q60769 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfaip3Q60769 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Tnfaip3Q60769 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfaip3Q60769 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfaip3Q60769 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
Tnfaip3Q60769 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfaip3Q60769 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfaip3Q60769 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfaip3Q60769 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfaip3Q60769 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfaip3Q60769 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfaip3Q60769 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfaip3Q60769 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Gm12928-201ENSMUST00000117115 573 ntBASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfaip3Q60769 Gm27892-201ENSMUST00000185017 106 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms