Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClpbQ60649 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClpbQ60649 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClpbQ60649 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.99□□□□□ -0.33
ClpbQ60649 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.99□□□□□ -0.33
ClpbQ60649 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.99□□□□□ -0.33
ClpbQ60649 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClpbQ60649 Gm8515-201ENSMUST00000194852 576 ntBASIC12.99□□□□□ -0.33
ClpbQ60649 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.99□□□□□ -0.33
ClpbQ60649 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.99□□□□□ -0.33
ClpbQ60649 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClpbQ60649 Gm15823-201ENSMUST00000064305 670 ntBASIC12.99□□□□□ -0.33
ClpbQ60649 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ClpbQ60649 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClpbQ60649 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClpbQ60649 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClpbQ60649 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClpbQ60649 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.99□□□□□ -0.33
ClpbQ60649 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ClpbQ60649 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClpbQ60649 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
ClpbQ60649 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClpbQ60649 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ClpbQ60649 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.99□□□□□ -0.33
ClpbQ60649 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClpbQ60649 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ClpbQ60649 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.98□□□□□ -0.33
ClpbQ60649 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ClpbQ60649 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.98□□□□□ -0.33
ClpbQ60649 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.98□□□□□ -0.33
ClpbQ60649 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ClpbQ60649 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ClpbQ60649 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ClpbQ60649 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ClpbQ60649 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClpbQ60649 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ClpbQ60649 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ClpbQ60649 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ClpbQ60649 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Gm6912-201ENSMUST00000117218 544 ntBASIC12.97□□□□□ -0.33
ClpbQ60649 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.97□□□□□ -0.33
ClpbQ60649 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.97□□□□□ -0.33
ClpbQ60649 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ClpbQ60649 Gm5354-201ENSMUST00000182417 973 ntBASIC12.97□□□□□ -0.33
ClpbQ60649 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.97□□□□□ -0.33
ClpbQ60649 Gm18018-201ENSMUST00000198273 408 ntBASIC12.97□□□□□ -0.33
ClpbQ60649 Gm18905-201ENSMUST00000205454 928 ntBASIC12.97□□□□□ -0.33
ClpbQ60649 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ClpbQ60649 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.97□□□□□ -0.33
ClpbQ60649 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ClpbQ60649 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.97□□□□□ -0.33
ClpbQ60649 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClpbQ60649 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClpbQ60649 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
ClpbQ60649 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
ClpbQ60649 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ClpbQ60649 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.96□□□□□ -0.33
ClpbQ60649 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms