Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Gm27731-201ENSMUST00000185192 107 ntBASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Gm6007-201ENSMUST00000208170 823 ntBASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.36□□□□□ -0.11
Shroom1Q5SX79 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Gm24644-201ENSMUST00000157114 139 ntBASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Gm37424-201ENSMUST00000191727 561 ntBASIC14.35□□□□□ -0.11
Shroom1Q5SX79 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Gm42550-201ENSMUST00000201553 960 ntBASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Shroom1Q5SX79 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Gm13392-201ENSMUST00000117708 150 ntBASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shroom1Q5SX79 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms