Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim41Q5NCC3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Trim41Q5NCC3 Gm26513-201ENSMUST00000181802 2489 ntBASIC23.37■■□□□ 1.33
Trim41Q5NCC3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim41Q5NCC3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim41Q5NCC3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim41Q5NCC3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim41Q5NCC3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Gm12616-201ENSMUST00000118594 382 ntBASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Gm12624-201ENSMUST00000177615 382 ntBASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Gm12621-201ENSMUST00000177760 382 ntBASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Gm12615-201ENSMUST00000177970 382 ntBASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Gm12622-201ENSMUST00000177975 382 ntBASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Gm12627-201ENSMUST00000178412 382 ntBASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Gm12625-201ENSMUST00000179122 382 ntBASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Gm12614-201ENSMUST00000179586 382 ntBASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Gm12613-201ENSMUST00000180323 382 ntBASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Gm16372-201ENSMUST00000073088 450 ntBASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Trim41Q5NCC3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim41Q5NCC3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Abhd6-203ENSMUST00000225234 1958 ntBASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Gm14350-201ENSMUST00000116642 640 ntBASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Gm15370-201ENSMUST00000117158 253 ntBASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Gm11618-201ENSMUST00000117946 267 ntBASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Gm14017-201ENSMUST00000121934 386 ntBASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC23.35■■□□□ 1.33
Trim41Q5NCC3 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Gm44064-201ENSMUST00000204964 1087 ntBASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Gm19208-201ENSMUST00000213861 912 ntBASIC23.35■■□□□ 1.33
Trim41Q5NCC3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Gm45684-201ENSMUST00000210244 1571 ntBASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim41Q5NCC3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Gm11331-201ENSMUST00000119764 288 ntBASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Gm45186-201ENSMUST00000206874 478 ntBASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Gm45118-201ENSMUST00000208928 825 ntBASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Gm8227-201ENSMUST00000223306 571 ntBASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Gm10268-201ENSMUST00000085340 555 ntBASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Gm18630-201ENSMUST00000222109 1397 ntBASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim41Q5NCC3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Trim41Q5NCC3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Gm37102-201ENSMUST00000195740 1105 ntBASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Trim41Q5NCC3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms