Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38aQ4FK66 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 Gm16372-201ENSMUST00000073088 450 ntBASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.74■□□□□ 0.11
Prpf38aQ4FK66 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Gm14350-201ENSMUST00000116642 640 ntBASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Mir1938-201ENSMUST00000158746 100 ntBASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38aQ4FK66 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Gm4271-201ENSMUST00000174444 973 ntBASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38aQ4FK66 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms