Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Arhgef40Q3UPH7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Arhgef40Q3UPH7 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Arhgef40Q3UPH7 Gm4760-201ENSMUST00000119663 1030 ntBASIC19.51■□□□□ 0.71
Arhgef40Q3UPH7 Gm12566-201ENSMUST00000121479 359 ntBASIC19.51■□□□□ 0.71
Arhgef40Q3UPH7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Arhgef40Q3UPH7 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
Arhgef40Q3UPH7 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Arhgef40Q3UPH7 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC19.51■□□□□ 0.71
Arhgef40Q3UPH7 AC154595.3-201ENSMUST00000224579 384 ntBASIC19.51■□□□□ 0.71
Arhgef40Q3UPH7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Gm9061-201ENSMUST00000182707 1006 ntBASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Arhgef40Q3UPH7 Gm43134-201ENSMUST00000199434 1886 ntBASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Gm8908-201ENSMUST00000121633 1024 ntBASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Gm13570-201ENSMUST00000140763 309 ntBASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Gm25043-201ENSMUST00000158604 212 ntBASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Gm3287-205ENSMUST00000228893 1332 ntBASIC19.49■□□□□ 0.71
Arhgef40Q3UPH7 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Gm14752-201ENSMUST00000120719 2075 ntBASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Gm12217-201ENSMUST00000118858 696 ntBASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Gm5523-201ENSMUST00000180415 997 ntBASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Mir7221-201ENSMUST00000184009 72 ntBASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Gm19963-201ENSMUST00000208413 1255 ntBASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Gm12626-201ENSMUST00000117339 1983 ntBASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Gm12623-201ENSMUST00000119849 1983 ntBASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Daam2-202ENSMUST00000224595 1926 ntBASIC19.48■□□□□ 0.71
Arhgef40Q3UPH7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Arhgef40Q3UPH7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Arhgef40Q3UPH7 Gm14208-201ENSMUST00000119645 678 ntBASIC19.47■□□□□ 0.71
Arhgef40Q3UPH7 Gm5597-201ENSMUST00000182353 1193 ntBASIC19.47■□□□□ 0.71
Arhgef40Q3UPH7 Gm31256-201ENSMUST00000194705 506 ntBASIC19.47■□□□□ 0.71
Arhgef40Q3UPH7 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Arhgef40Q3UPH7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC19.47■□□□□ 0.71
Arhgef40Q3UPH7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Arhgef40Q3UPH7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Arhgef40Q3UPH7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Arhgef40Q3UPH7 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms