Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nlrc4Q3UP24 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nlrc4Q3UP24 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.21□□□□□ -0.14
Nlrc4Q3UP24 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nlrc4Q3UP24 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nlrc4Q3UP24 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nlrc4Q3UP24 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nlrc4Q3UP24 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.21□□□□□ -0.14
Nlrc4Q3UP24 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nlrc4Q3UP24 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Gm12928-201ENSMUST00000117115 573 ntBASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nlrc4Q3UP24 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Nlrc4Q3UP24 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nlrc4Q3UP24 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nlrc4Q3UP24 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nlrc4Q3UP24 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nlrc4Q3UP24 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nlrc4Q3UP24 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nlrc4Q3UP24 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nlrc4Q3UP24 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nlrc4Q3UP24 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nlrc4Q3UP24 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nlrc4Q3UP24 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nlrc4Q3UP24 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms